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CSHL Single Cell Biology Core
June 2024
Speakers:
Jon Preall
Spatial 'Omics at the Single Cell Core
Claire Regan
Getting Started with Visium
General Resources and Tutorials:
Awesome Spatial Omics Github and Awesome Single Cell Github
Guidebook of Spatial Transcriptomics Review
Best Practices for Spatial Transcriptomics Analysis with Bioconductor
Some packages to check out:
R Packages:
Python Packages:
stLearn (requires python 3.8 which can make it a bit challenging to include in an environment)
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